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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST003915
species: Oryza sativa
miRNA family: MIR814
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CACTTTATAGTACAACGAATC

miRNA*
 TTCGTTATACTATGAAGTGTC

mismatches: 1
bulges: 0
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pre-miRNA
 AGAAAATATAACAATCTAAAACCGGATGTGACACTTTATAGTACAACGAATCTGGACAGAAAACATATCTAGATTCGTTATACTATGAAGTGTCTCGTTC
GGTACTAGATTGCTATATTATA

dot-bracket secondary structure
....((((((.(((((((..((((((((.((((((((((((((.((((((((((((...........)))))))))))).)))))))))))))).)))))
)))..))))))).))))))...


SIMILARITIES
miRBase osa-MIR814c: 3e-17

PMRD osa-miR814c: 3e-17

microPC miR1436: 0.000000002		UniProt no hits

RFAM MIR1122: 1e-25		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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